BIOL 3071 class and Gel/Qubit for controls
small gel for lobster samples: 1.5% = 1.5g agarose, 100 mL TAE
- BAR primer samples (see 11-2-2020) on top
- HCO/LCO samples on bottom
- Run 85V at 12:00 pm, view at 12:38 pm
Results: BAR primers worked, HCO/LCO did not
medium gel for fish (BIOL 3071): 1.5% = 2.25g agarose, 150 mL TAE
8ul in each well
First Row | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | |——|——|——|——|——|——|——|——|——|——|——|——|——|——|——|——| | BW |KKBW 1|KKBW +| KK | JG - | JG + | JTZ 1| JMG | 50bp | MK + | MK - | JMMK | AMKK | 2 | SMS 1| SMS -|
Second Row | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | |——|——|——|——|——|——|——|——|——|——|——|——|——|——|——|——| | MB + |AMK 1 |AMK - |JRP 2 |AMK + |AES - |AES + | AES | 50bp | AS | KT | AMY |RMY + | KT - | DH | SMS |
Qubit
Make sure all liquids are room temp
- 1:199 ratio reagent to buffer = working solution
- to make standards: 190 uL working soln., 10 uL standard in Qubit assay tubes
- to make samples: 5 uL sample, 195 ul working soln. in Qubit assay tubes
For samples from 11-2-2020, (controls):
- working soln. 9 samples = 9 uL reagent, 1791 uL buffer
- vortex each sample very briefly and spin down
Results:
Sample # | ug/mL | stock density |
---|---|---|
PM-16 | 0.367 | 14.68 |
PM-17 | < 0.01 | 0.4 |
PM-18 | 0.0155 | 0.62 |
PM-19 | 0.0122 | 0.488 |
Fiji 015 | 0.0289 | 1.156 |
10-009 | 0.0118 | 0.472 |
10-0011 | 0.0498 | 1.992 |
Written on November 9, 2020